This zipped folder contains the scripts and data used for the article BD Ohlinger, R Schürch, MR Silliman, TN Steele, & MJ Couvillon (2022) "Dance-communicated distances support nectar foraging as a supply-driven system", Biology Letters. Additionally, it contains a README file with descriptions of the files used for the analysis.
Publisher
University Libraries, Virginia TechLocation
Virginia, USACorresponding Author Name
Bradley D. OhlingerFiles/Folders in Dataset and Description
[supply_driven_analysis.zip] - ZIP archive containing all necessary files to reproduce the analysis presented in Ohlinger, Schürch et al. (2022)
[README] - README file containing descriptions of
folders and files in repository
[04_data] - data folder containing raw data and
intermediate computational steps
[calibration_data] - folder containing data for
simulating dances
[distance_calib_obj_Universal1000.RData] - Rdata
file containing the universal calibration dataset
used for dance simulation
[csv] - folder containing comma-separated value files
with results of statistical analyses
[dance_agg_data.csv] – comma-separated values
file containing point estimate locations for each
simulated waggle dance
[dance_data.csv] – comma-separated values file
containing simulated dance locations (1000 per
dance) for the full dataset
[disc_18_pairs.csv] – comma-separated values file
containing estimated marginal mean differences in
communicated foraging distance and 95%
confidence intervals between nectar and pollen
foragers at the Winchester site in 2018
[disc_19_pairs.csv] – comma-separated values file
containing estimated marginal mean differences in
communicated foraging distance and 95%
confidence intervals between nectar and pollen
foragers at the Winchester site in 2019
[mean_diff_ft.csv] – comma-separated values file
containing estimated marginal mean differences in
communicated foraging distance and 95%
confidence intervals between nectar and pollen
foragers in the full dataset
[month_emm.csv] – comma-separated values file
containing monthly estimated marginal mean
communicated foraging distances and 95%
confidence intervals for nectar and pollen foragers in
the full dataset
[month_pairs.csv] – comma-separated values file
containing monthly estimated marginal mean
differences in communicated foraging distance and
95% confidence intervals between nectar and pollen
foragers at the three field sites (Blacksburg,
Winchester, and Tidewater) in the full dataset
[site_pairs.csv] – comma-separated values file
containing estimated marginal mean differences in
communicated foraging distance and 95%
confidence intervals between nectar and pollen
foragers at the three field sites (Blacksburg,
Winchester and Tidewater) in the full dataset
[site_pairs_18.csv] - commaseparated values file
containing estimated marginal mean differences in
communicated foraging distance and 95%
confidence intervals between nectar and pollen
foragers at the three field sites (Blacksburg,
Winchester and Tidewater) during the 2018 field
season
[site_pairs_19.csv] – comma-separated values file
containing estimated marginal mean differences in
communicated foraging distance and 95%
confidence intervals between nectar and pollen
foragers at the three field sites (Blacksburg,
Winchester and Tidewater) during the 2019 field
season
[points] - folder containing Rdata files that consist of
points that represent simulated dance locations
[Allsample.blacksburg_points.RData] - Rdata file
consisting of points that represent the simulated dance
locations for the Blacksburg, VA field site
[Allsample.tidewater_points.RData] - Rdata file
consisting of points that represent the simulated dance
locations for the Tidewater, VA field site
[Allsample.winchester_points.RData] - Rdata file
consisting of points that represent the simulated dance
locations for the Winchester, VA field site
[distance.blacksburg_points.RData] - Rdata file
consisting of points that represent the simulated
distances for the Blacksburg, VA field site
[distance.tidewater_points.RData] - Rdata file
consisting of points that represent the simulated
distances for the Tidewater, VA field site
[distance.winchester_points.RData] - Rdata file
consisting of points that represent the simulated
distances for the Winchester, VA field site
[05_code] - folder containing R scripts for analysis and
dance simulation
[supply_driven_analysis.R] - R script containing the full
analysis
[scripts] - folder containing R scripts for system
preparation and dance simulation
[00_system_prep.R] - R script with code that prepares
the system for analysis
[01_dance_data_prep_supply_driven.R] - R script with
code that formats data for analysis
[03_01_simulate_dances.R] - R script with code that
simulates the waggle dances
[azimuth.R] - R script with code that calculates the
solar azimuth for dance simulation
[06_reports] - folder containing content reported in
the publication
[Figures] - folder containing figures reported in the
publication
[Figure_1.png] - figure showing estimated
marginal mean communicated foraging distances
and 95% confidence intervals for nectar versus
pollen foragers in the full dataset
[Figure_2.png] - figure showing monthly estimated
marginal mean communicated foraging distances
and 95% confidence intervals for nectar versus
pollen foragers in full dataset
